Publications | Jifan Gao 高济凡

2026

Right Diagnoses, Decorative Reasoning: A Perturbation Audit of Medical Chain-of-Thought

Xu M, Gao J, Jiang X, Wu Y, Long X

EMNLP 2026 Main Conference

Explainable Multimodal Deep Learning Models for Variable-Length Sequences in Critically Ill Patients

Martin J, Afshar M, Safipour Afshar A, Caskey J, Dligach D, Gao Y, Gao J, Chen G, Mayampurath A, Churpek MM

Journal of Biomedical Informatics

MoMA: A Mixture-of-Multimodal-Agents Architecture for Enhancing Clinical Prediction Modelling

Gao J, Rahman M, Caskey J, Oguss M, O'Rourke A, Brown R, Stey A, Mayampurath A, Churpek MM, Chen G, Afshar M

npj Digital Medicine

2025

Count-Based Approaches Remain Strong: A Benchmark Against Transformer and LLM Pipelines on Structured EHR

Gao J, Rosenthal M, Wolpin B, Cristea S

NeurIPS 2025 GenAI for Health Workshop

Comparison of Deep Learning Approaches Using Chest Radiographs for Predicting Clinical Deterioration: Retrospective Observational Study

Rahman M, Gao J, Carey K, Edelson DP, Afshar A, Garrett JW, Chen G, Afshar M, Churpek MM

JMIR AI

2024

MCCE: Missingness-aware Causal Concept Explainer

Gao J, Chen G

arXiv preprint

Crowd-sourced Machine Learning Prediction of Long COVID Using Data from the National COVID Cohort Collaborative

Bergquist T, Loomba J, Pfaff E, Xia F, Zhao Z, Zhu Y, et al., including Gao J

EBioMedicine

Fair Prediction of Two-year Stroke Risks in Patients with Atrial Fibrillation

Gao J, Mar P, Tang Z, Chen G

Journal of the American Medical Informatics Association

Automated Stratification of Trauma Injury Severity across Multiple Body Regions Using Multi-modal, Multi-class Machine Learning Models

Gao J, Chen G, O’Rourke AP, Caskey J, Carey K, Oguss M, Stey A, Dligach D, Miller T, Mayampurath A, Churpek MM, Afshar M

Journal of the American Medical Informatics Association

Microbiome Preterm Birth DREAM Challenge: Crowdsourcing Machine Learning Approaches to Advance Preterm Birth Research

Golob JL, Oskotsky TT, Tang A, Roldan A, Chung V, Ha CW, Wong R, Flynn K, et al., including Gao J

Cell Reports Medicine

Evaluation of Crowdsourced Mortality Prediction Models as a Framework for Assessing AI in Medicine

Bergquist T, Schaffter T, Yan Y, Yu T, Prosser J, Gao J, Chen G, et al.

Journal of the American Medical Informatics Association

2023

A Hybrid System to Understand the Relations Between Assessments and Plans in Progress Notes

Gao J, He S, Hu J, Chen G

Journal of Biomedical Informatics

A Framework for Future National Pediatric Pandemic Respiratory Disease Severity Triage: The HHS Pediatric COVID-19 Data Challenge

Bergquist T, Wax M, Bennett TD, Moffitt R, Gao J, Chen G, Telenti A

Journal of Clinical and Translational Science

2021

More Generalizable Models for Sepsis Detection under Covariate Shift

Gao J, Mar PL, Chen G

AMIA Summits on Translational Science Proceedings

A Continuously Benchmarked and Crowdsourced Challenge for Rapid Development and Evaluation of Models to Predict COVID-19 Diagnosis and Hospitalization

Yan Y, Schaffter T, Bergquist T, Yu T, Prosser J, Aydin Z, Jabeer A, Brugere I, Gao J, Chen G, Causey J

JAMA Network Open